Prevalence and Molecular Characterization of Vancomycin Variable Enterococcus faecium Isolated From Clinical Specimens
2024; 44(5): 450-454
Ann Lab Med 2020; 40(3): 238-244
Published online May 1, 2020 https://doi.org/10.3343/alm.2020.40.3.238
Copyright © Korean Society for Laboratory Medicine.
Young Eun Kwon , M.D., Ph.D.1,*, Dong-Jin Oh , M.D., Ph.D.1,*, Moon Jung Kim , M.D., Ph.D.2, and Hye Min Choi, M.D., Ph.D.1
1Department of Internal Medicine, Myongji Hospital, Hanyang University College of Medicine, Goyang, Korea; 2Department of Laboratory Medicine, Myongji Hospital, Hanyang University College of Medicine, Goyang, Korea
Correspondence to: Hye Min Choi, M.D., Ph.D.
Division of Nephrology, Department of Internal Medicine, Myongji Hospital, Hanyang University College of Medicine, 55 Hwasu-ro 14beon-gil, Deogyang-gu, Goyang 10475, Korea
Tel: +82-31-810-6030 Fax: +82-31-969-0500 E-mail: ltriver@hanmail.net
* These authors equally contributed to this study.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Pyuria seems to be common in chronic kidney disease (CKD), irrespective of urinary tract infection (UTI). It has been hypothesized that sterile pyuria occurs in CKD because of chronic renal parenchymal inflammation. However, there are limited data on whether CKD increases the rate of pyuria or how pyuria in CKD should be interpreted. We investigated the prevalence and characteristics of asymptomatic pyuria (ASP) in CKD via urinary white blood cell (WBC) analysis.
Urine examination was performed for all stable hemodialysis (HD) and non-dialysis CKD patients of the outpatient clinic (total N=298). Patients with infection symptoms or recent history of antibiotic use were excluded. Urine culture and WBC analysis were performed when urinalysis revealed pyuria.
The prevalence of ASP was 30.5% (24.1% in non-dialysis CKD and 51.4% in HD patients). Over 70% of the pyuria cases were sterile. The majority of urinary WBCs were neutrophils, even in sterile pyuria. However, the percentage of neutrophils was significantly lower in sterile pyuria. In multivariate logistic regression analysis, the degree of pyuria, percentage of neutrophils, and presence of urinary nitrites remained independently associated with sterile pyuria.
The prevalence of ASP was higher in CKD patients and increased according to CKD stage. Most ASP in CKD was sterile. Ascertaining the number and distribution of urinary WBCs may be helpful for interpreting ASP in CKD.
Keywords: Asymptomatic pyuria, Chronic kidney disease, Cellular analysis, Prevalence, Sterile, Neutrophil
Pyuria is a useful marker for assessing urinary tract infection (UTI) in the general population. The presence of pyuria is, in general, highly suggestive of UTI, especially in symptomatic patients. Pyuria seems to be common in patients with chronic kidney disease (CKD). Sterile pyuria is considered to occur in CKD owing to chronic renal parenchymal inflammation [1,2]. However, there are limited data on whether CKD increases the rate of pyuria or how pyuria in CKD should be interpreted [2]. In fact, to our knowledge, the prevalence or characteristics of pyuria has never been investigated, especially in non-dialysis CKD patients.
Studies have addressed the diagnostic value of pyuria in CKD patients, particularly those undergoing dialysis. The prevalence of pyuria in dialysis patients has been reported to range from 31% to 72% [1,2,3,4,5,6], and the rate of documented UTI in these patients ranges from 25% to 45%. In addition, the presence of pyuria may not indicate UTI in dialysis patients [1,4,5,7]. Cellular analysis of ascites is useful for early diagnosis of spontaneous bacterial peritonitis in liver cirrhosis patients, and induced sputum analysis provides information on the inflammatory phenotype of airway disease [8,9]. In the early 1970s, Cabaluna, et al. [1] reported that pyuria is a common finding in hemodialysis (HD) patients that often occurs in the absence of infection. Of interest was the observation that the majority of white blood cells (WBCs) in the urine seemed to be lymphocytes. Unfortunately, no studies have explored urinary cell analysis as a follow-up to these observations of Cabaluna, et al. [1].
We examined whether CKD patients have an increased prevalence of asymptomatic pyuria (ASP) compared with the non-CKD population. In addition, we analyzed urinary WBCs to investigate the characteristics of pyuria and the usefulness of urinary cell analysis in identifying sterile pyuria in the CKD population.
This single-center, cross-sectional study was performed at the Myongji Hospital, Gyeonggi-do, Korea. The study was approved by the Institutional Review Board of the Myongji Hospital (approval no. MJH15-024), and written informed consent was obtained from all patients.
All HD patients in the dialysis center who voided at least twice every day were included, and urine was obtained before the start of dialysis between September 2016 and March 2017. In addition, stable non-dialysis CKD patients with an estimated glomerular filtration rate (eGFR) <60 mL/min/1.73 m2, who visited the outpatient clinic during the study period, were included. eGFR was calculated based on the Chronic Kidney Disease-Epidemiology Collaboration (CKD-EPI) equation [10]. Non-dialysis CKD was divided into stages 3 (eGFR 30–59 mL/min/1.73 m2), 4 (eGFR 15–29 mL/min/1.73 m2), and 5 (eGFR <15 mL/min/1.73 m2) according to the Kidney Disease Improving Global Outcomes criteria [11].
We excluded patients with evident symptoms of infection, history of antibiotic treatment in the previous month, bladder catheterization, ileal conduit, and combined acute kidney injury. Additionally, patients who did not cooperate were excluded, including those with impaired mobility from whom it was difficult to obtain reliable urine samples.
Overall, the study included 298 patients (179 males, 119 females; median age, 70.5 years [interquartile range (IQR), 57–77 years]). Among them, 70 were HD patients (51.4% males, median age 62 years [IQR 52–71 years]; dialysis vintage, 23.4±25.9 months), and 228 were non-dialysis CKD patients (62.7% males, median age 73 years [IQR 60–78 years]).
For comparison, the prevalence of pyuria in the general population was determined from the data of subjects who received comprehensive health examinations at the same hospital during the study period (total N=3,691; age, >40 years; eGFR ≥60 mL/min/1.73 m2). All CKD patients included in the study, except five, were aged >40 years. The median age of the general population (2,489 males, 1,202 females) was 51 years (IQR 45–58 years).
Clean-catch midstream urine was obtained and processed within one hour of voiding. Urinalysis and urine protein:creatinine ratio (UPCR) were examined for the entire study population. Briefly, fresh urine samples were first examined using an automated analyzer (Cobasu411, Roche Diagnostics, Basel, Switzerland), and parameters such as specific gravity, pH, WBC, and presence of urinary nitrites were recorded. Next, 10 mL of urine was centrifuged (400×
In this study, urine culture was performed in 86 of the 91 patients with pyuria. Urine culture was performed on MacConkey agar, blood agar, and enrichment media using the platinum loop method. Colony was identified using the Vitek system (bioMerieux, Durham, NC, USA). For urinary WBC analysis, if pyuria was confirmed, 100–200 µL of undiluted urine were cytospun onto glass slides using a Cytospin centrifuge (Cellspin, Hanil, Gimpo, Korea) (400×
Pyuria with significant bacteriuria (≥105 colony forming units [CFU]/mL) was defined as UTI. Pyuria without significant bacteriuria was defined as sterile pyuria. Hematuria was defined as the detection of red blood cells at ≥5/HPF in microscopy, and proteinuria was defined as UPCR ≥1.
For serum chemistry, peripheral blood was collected into sterile SST vacuum tubes, centrifuged at 3,000×
SPSS version 20 (IBM Corp, NY, USA) was mainly used for statistical analyses. Data were presented as means with standard deviation (SD) or as absolute numbers with percentages. Groups were compared using the Student's
The utility of the number and distribution of urinary WBCs in UTI detection was assessed by ROC curve analysis using MedCalc Software (version 18.10.2, Ostend, Belgium). Pyuria was further grouped as 6–9, 10–19, 20–49, and ≥50 WBCs/HPF.
The overall ASP prevalence was 30.5% (18.4% in males and 48.7% in females). As shown in Fig. 1, ASP prevalence increased with CKD stage. It was 51.4% (36.1% in males and 67.6% in females) in the 70 HD patients and 24.1% (14.0% in males and 41.2% in females) in the 228 non-dialysis CKD patients.
Pyuria prevalence in the general population was 7.2% (1.6% in males and 18.7% in females) (Supplemental Data Table S1).
Next, we compared the baseline and clinical characteristics of pyuric and non-pyuric CKD patients. As in the general population, pyuria was more common in female than in male patients (Table 1). The pyuric group had more advanced stages of CKD compared with the non-pyuric group. In addition, co-morbid diabetes was more common (64.8% vs. 48.3%,
Among the 86 ASP patients who were further analyzed by urine culture, 67 (77.9%) were confirmed as sterile pyuria (88.9% of HD and 70.0% of non-dialysis CKD patients). The majority of the bacteria (78.9%) were
Contrary to our expectations that lymphocytes would be the predominant WBCs, most urinary WBCs were neutrophils, even in the sterile pyuria group. However, the percentage of neutrophils was significantly lower (70.2% vs. 92.8%,
In particular, all pyuria cases with neutrophils accounting for <60% of the urinary WBCs were sterile. Furthermore, neutrophils accounted for ≥90% of the urinary WBCs in all bacteriuria cases, except two, which showed 61% and 72% neutrophils.
In univariate analysis, sex, CKD classification, the number and distribution of urinary WBCs, and presence of urinary nitrites were significant parameters for UTI (Table 3). In multivariate analysis, the degree of pyuria, percentage of neutrophils, and presence of urinary nitrites remained independently associated with higher odds of UTI.
We evaluated the diagnostic performance of the number of urinary WBCs and the percentage of neutrophils in UTI identification using ROC curves (Fig. 2).
The number of urinary WBCs detected in UTI with an area under the curve (AUC) of 0.778 (95% CI 0.661–0.870,
The CKD population had higher ASP prevalence (in both male and female patients) than the non-CKD population, and it increased with CKD stage. Pyuria was more common in female patients and patients with diabetes, higher stages of CKD, proteinuria, hematuria, lower Hb and Alb, and higher CRP. Over 70% of the pyuria cases were sterile, and the majority of urinary WBCs were neutrophils, even in sterile pyuria. However, the percentage of neutrophils was significantly lower in sterile pyuria group than in UTI group (70.2% vs. 92.8%). In multivariate logistic regression analysis, the degree of pyuria, percentage of neutrophils, and presence of urinary nitrites were independently associated with sterile pyuria.
In general, CKD patients present with many comorbidities, including diabetes and neurogenic bladder that contribute to bladder stasis, thereby increasing the risk of UTI. Data on the prevalence of UTI among CKD patients is limited, although some authors have suggested that the frequency of UTI might not differ from that in the general population [14]. In the present study, the prevalence of bacteriuria was 6.6% (1.1% in males and 14.3% in females) in the asymptomatic CKD population. We were unable to determine the prevalence of asymptomatic bacteriuria (ASB) in the general population because the regular health examinations did not include a urine culture. A recent meta-analysis showed that diabetic patients have a higher prevalence of ASB than healthy controls (12.2% vs. 4.5%) [15].
The diagnosis of UTI in CKD patients can be challenging. UTI symptoms are mostly related to voiding, which is particularly reduced in end-stage renal disease patients. Moreover, it has been suggested that sterile pyuria is common in CKD patients [1,16]. Our results confirm that ASP is more common in the CKD than in the non-CKD population (24.1% in non-dialysis CKD and 51.4% in HD patients vs. 7.2% in the non-CKD population). A previous study reported a significantly higher ASP prevalence in both male (12.2% vs. 3.4%) and female (21.4% vs. 8.7%) diabetic patients compared with that in the non-diabetic population [17]. In the present study, ASP was even more common in the CKD population (17.2% in males and 47.5% in females) than in the diabetic population. The factors underlying higher ASP prevalence in the CKD population, despite the relatively modest bacteriuria prevalence, are unknown and need to be further examined.
It is noteworthy that 78% of the pyuria cases were sterile. Overall, 24.2% of the asymptomatic CKD population (17.3% males and 34.5% females) showed sterile pyuria (Supplemental Data Table S2). A previous study reported that 2.6% males and 13.9% females have sterile pyuria in the general population; these values were lower than those observed in the CKD patients in this study [18,19]. Moreover, the prevalence of sterile pyuria increased with increasing CKD stage (Supplemental Data Table S2). Although we could not fully determine the causes of sterile pyuria in CKD patients, various possibilities exist, including leakage of cells due to tubulointerstital injury.
While it seems that pyuria is common in CKD patients and a low degree of pyuria might be sterile, optimal cut-off values for urinary WBC counts for predicting sterile pyuria in CKD patients have not yet been established. In the present study, pyuria with ≥10 WBCs/HPF was indicative of UTI with high sensitivity (89.5%) but low specificity (53.7%), while pyuria with ≥20 WBCs/HPF showed favorable sensitivity (79.0%) and specificity (70.2%) for UTI detection. The negative predictive value of urinary WBCs at a cut-off value of 10 WBCs/HPF was 94.7%. In other words, if urinary WBC count was <10 WBCs/HPF in asymptomatic CKD patients, the possibility of sterile pyuria is >90%.
In contrast to our expectation that lymphocytes would account for most of the WBCs, the majority of urinary WBCs were neutrophils, even in sterile pyuria. This finding also contrasted with that of Cabaluna, et al. [1], although they did not report concrete differential cell count results. In this study, a low percentage of urinary neutrophils (<70%) was associated with a high probability of sterile pyuria (specificity 94.4%). The present findings are valuable as they present an additional tool for predicting sterile pyuria in pyuric CKD patients. Urinary cell analysis may help reduce unnecessary antibiotic administration or suspicion of other factors in the initial stages of asymptomatic infection. Examination of pyuria patterns through urinary cell analysis in more diverse CKD populations might provide valuable information regarding the pathobiological pathways involved in CKD.
This study had several limitations. First, despite the relatively large sample size, this was a single-center study. Second, the criteria for diagnosing UTI vary from study to study. Given that this study included an asymptomatic CKD population, UTI may actually mean ASB. However, originally, the term
Despite these limitations, we believe our results are important as we addressed the prevalence of sterile pyuria in an asymptomatic CKD population. To our knowledge, the prevalence of ASP or sterile pyuria has never been investigated according to CKD stage, and this is the first study to perform urinary cell analysis in pyuric CKD patients.
In conclusion, sterile pyuria is common in CKD patients. The number and distribution of urinary WBCs may be helpful for predicting sterile pyuria in CKD patients with pyuria. A large, prospective study with longitudinal follow-up may further clarify the interpretation of urinalysis in the CKD population.
The prevalence of pyuria according to the level of renal function. The prevalence of pyuria was investigated in asymptomatic CKD population. CKD was divided into HD and non-dialysis CKD; non-dialysis CKD was further classified as stages 3, 4, and 5 according to the KDIGO classification [11]. The prevalence of pyuria in the non-CKD population was estimated from regular health examination data at the study hospital and included control patients aged >40 years with eGFR ≥60 mL/min/1.73 m2.
Abbreviations: CKD, chronic kidney disease; eGFR, estimated glomerular filtration rate; HD, hemodialysis; KDIGO, Kidney Disease Improving Global Outcomes.
ROC curves showing the effectiveness of the number and distribution of urinary WBCs in UTI identification. The number of WBCs was analyzed at different cut-off values: ≥10, ≥20, and ≥50 WBCs/HPF.
Abbreviations: ROC, receiver operating characteristic; UTI, urinary tract infection; WBC, white blood cells; HPF, high-power field.