Diagnostic Accuracy of Plasma Renin Concentration and Renin Activity in Predicting Mortality and Kidney Outcomes in Patients With Septic Shock and Hypoperfusion or Hypotension: A Multicenter, Prospective, Observational Study
2024; 44(6): 497-506
Ann Lab Med 2023; 43(5): 443-450
Published online April 21, 2023 https://doi.org/10.3343/alm.2023.43.5.443
Copyright © Korean Society for Laboratory Medicine.
Jong-Min Park , Ph.D.1,2,*, Mijung Kwon
, M.T.3,*, Ki Ho Hong
, M.D.3, Hyukmin Lee
, M.D.3, and Dongeun Yong, M.D.3
1Materials Science and Engineering, School of Future Convergence, Hallym University, Chuncheon, Korea; 2Interdisciplinary Program of Nano-Medical Device Engineering and Integrative Materials Research Institute, Hallym University, Chuncheon, Korea; 3Department of Laboratory Medicine and Research Institute of Bacterial Resistance, Yonsei University College of Medicine, Seoul, Korea
Correspondence to: Dongeun Yong, M.D.
Department of Laboratory Medicine and Research Institute of Bacterial Resistance, Yonsei University College of Medicine, 50-1 Yonsei-ro, Seodaemun-gu, Seoul 03722, Korea
Tel: +82-2-2228-2442
Fax: +82-2-364-1583
E-mail: deyong@yuhs.ac
* These authors equally contributed to this study.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Background: Early diagnosis and treatment are important for a good prognosis of bloodstream infections. The European Committee on Antimicrobial Susceptibility Testing (EUCAST) recommends rapid antimicrobial susceptibility testing (RAST) based on the disk diffusion methodology for 4, 6, and 8 hours of incubation. We evaluated EUCAST-RAST of Escherichia coli, Klebsiella pneumoniae, and Staphylococcus aureus from positive blood culture bottles.
Methods: Twenty strains of E. coli, K. pneumoniae, and S. aureus were tested using EUCAST-RAST. Ten antimicrobial agents against E. coli and K. pneumoniae and four agents against S. aureus were tested. The diameter of the inhibition zone (mm) was compared with the minimal inhibitory concentration (μg/mL) obtained using the Sensititre AST system (TREK Diagnostic Systems, East Grinstead, UK).
Results: For E. coli, the percentage of total categorical agreement (CA) was 69.5% at 4 hours, and 87% at 8 hours. For K. pneumoniae, the total CA was 89% at 4 hours, and 95.5% at 6 hours. For S. aureus, the total CA was 100% after 4 hours. Discrepancies were observed mainly for E. coli with β-lactam antimicrobial agents, and the numbers of errors decreased over time.
Conclusions: EUCAST-RAST for K. pneumoniae and S. aureus met the United States Food and Drug Administration criteria at 6 and 4 hours, respectively, whereas that for E. coli did not meet the criteria for up to 8 hours. RAST can shorten the turn-around testing time by more than one day; therefore, if applied accurately according to laboratory conditions, antimicrobial agent results can be reported faster.
Keywords: Sepsis, European Committee on Antimicrobial Susceptibility Testing, Rapid antimicrobial susceptibility testing, Microbial sensitivity test, Categorical agreement, United States Food and Drug Administration, Escherichia coli, Klebsiella pneumoniae, Staphylococcus aureus
Bacteremia can develop into sepsis, and bloodstream infections are a leading cause of high morbidity and mortality worldwide [1-4]. Therefore, early diagnosis and treatment are important for a good prognosis in sepsis.
Blood cultures are the reference method for determining the cause of bacteremia and provide critical information for initiating appropriate antimicrobial therapy [5-9]. Because of the increase in multidrug-resistant bacterial infections such as methicillin-resistant
Typically, AST is performed using the broth microdilution (BMD) method or disk diffusion method [16-18]. The results are reported qualitatively using CLSI and the European Committee on Antimicrobial Susceptibility Testing (EUCAST) guidelines (susceptible, intermediate, resistant, or an area of technical uncertainty [ATU]) [19-22].
The BMD method takes 24 hours and the disk diffusion method takes 16-20 hours to complete. Therefore, it takes at least three days for the final report of the blood culture to be provided. The EUCAST provides rapid AST (RAST) guidelines based on the standard disk diffusion method to shorten the turn-around time (TAT) required for AST. This method is faster than the conventional method because culture-positive blood samples are directly inoculated into media and analyzed after 4, 6, and 8 hours of incubation [23]. The EUCAST-RAST method is currently available for testing
We aimed to evaluate EUCAST-RAST of
This study was conducted between August 2019 and February 2020 at the Department of Laboratory Medicine, Severance Hospital (Seoul, Korea). Sixty strains of
Blood samples were inoculated into BacT-ALERT FA Plus bottles and incubated on a BacT-ALERT VIRTUO blood culture system (BioMérieux, Durham, NC, USA). When a blood bottle was flagged as positive by the instrument, it was subjected to Gram staining, and a preliminary result was reported. The sample was then sub-cultured on sheep blood agar and MacConkey agar (Asan Pharmaceutical, Hwaseong, Korea). After overnight incubation at 35°C, all bacterial species were identified using Microflex with a Biotyper IVD MBT v.2.3 matrix-assisted laser desorption ionization-time-of-flight mass spectrometry system (Bruker Daltonics, Bremen, Germany), according to the manufacturer’s instructions.
Strains for QC and clinically isolated strains were subjected to RAST according to the EUCAST guidelines, and the results were compared with conventional Sensititre BMD results.
Ten antimicrobial agents (piperacillin–tazobactam, cefotaxime, ceftazidime, imipenem, meropenem, ciprofloxacin, amikacin, gentamicin, tobramycin, and trimethoprim–sulfamethoxazole) for
Comparison of antimicrobial agent concentration between the EUCAST and CLSI guidelines used in this study
Species (N antimicrobial agents tested) | Antimicrobial agent | Disk content (μg) | |
---|---|---|---|
EUCAST | CL | ||
Piperacillin–tazobactam | 30-6 | 100-10 | |
Cefotaxime | 5 | 30 | |
Ceftazidime | 10 | 30 | |
Imipenem | 10 | 10 | |
Meropenem | 10 | 10 | |
Ciprofloxacin | 5 | 5 | |
Amikacin | 30 | 30 | |
Gentamicin | 10 | 10 | |
Tobramycin | 10 | 10 | |
Trimethoprim–sulfamethoxazole | 1.25-23.75 | 1.25-23.75 | |
Cefoxitin* | 30 | 30 | |
Norfloxacin† | 10 | 10 | |
Gentamicin | 10 | 10 | |
Clindamycin | 2 | 2 |
*Isolates susceptible to cefoxitin are reported as susceptible to all β-lactam agents with breakpoints in the EUCAST clinical breakpoint tables (standard methodology); †The norfloxacin disk diffusion test was used to screen for fluoroquinolone resistance.
Abbreviation: EUCAST, European Committee on Antimicrobial Susceptibility Testing.
All
The test volume for direct RAST is suggested by the EUCAST [23]. After transferring the content of the positive blood culture bottle into an empty tube, 125±25 μL of undiluted blood culture broth was transferred to a 90-mm circular Mueller-Hinton agar plate (Asan Pharmaceutical, Hwaseong, Korea), or 350 μL was transferred to a 150-mm plate. The plates were inoculated using a Retro C80 Inoculator (AB BIODISK, Solna, Sweden), and disks for each antimicrobial agent were placed on the agar surface using BD BBL Sensi-Disc dispensers (Becton, Dickinson and Company).
Plates were incubated for 4, 6, and 8 hours at 35°C under ambient air and re-incubated within 10 mins after the stated reading time. In total, 1,440 AST results (600 for
BMD was performed for all isolates using the Sensititre AST system (TREK Diagnostic Systems, East Grinstead, UK) based on the CLSI M100-S29 guidelines [26]. The Sensititre AIM Automated Inoculation Delivery System, Sensititre VIZION Digital MIC Viewing System, Sensititre DKMGN, and GPALL1F panel were used, and the MIC results were analyzed using the Sensititre SWIN software.
The EUCAST standard disk diffusion method was used as a reference to compare the susceptibilities of
To determine the accuracy of the RAST method, QC was conducted according to EUCAST recommendations for 30 days.
Discrepancies between EUCAST-RAST and Sensititre BMD results were, based on the CLSI guidelines, classified as very major errors (VMEs; susceptible in RAST and resistant in the reference method), major errors (MEs; resistant in RAST and susceptible in the reference method), or minor errors (mEs; susceptible or resistant in RAST and intermediate in the reference method). According to the United States Food and Drug Administration (FDA) recommendations, the acceptability criteria are >89.9% for CA (same susceptible, intermediate, resistant classification), >89.9% for essential agreement (EA; MICs within one two-fold dilution of the values obtained using the reference method), ≤1.5% for VMEs (false susceptibility based on the number of resistant organisms), and ≤3% for MEs (false resistance based on the number of susceptible isolates) [28].
After interpretation according to the AST breakpoint table, the EUCAST-RAST results were compared with the Sensititre BMD results based on the CLSI criteria. However, some antimicrobial agents against
The number of
For
To evaluate the RAST method, the AST results at 4, 6, and 8 hours were compared with those obtained using standard methods.
For the 200
CA and discrepancy of RAST
Antimicrobial agent | N (%) at 4 hr | N (%) at 6 hr | N (%) at 8 hr | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
CA | mEs | MEs | VMEs | CA | mEs | MEs | VMEs | CA | mEs | MEs | VMEs | |
TZP | 0 (0) | 14 (70) | 6 (30) | 0 (0) | 6 (30) | 13 (65) | 1 (5) | 0 (0) | 12 (60) | 7 (35) | 1 (5) | 0 (0) |
CTX | 17 (85) | 1 (5) | 1 (5) | 1 (5) | 19 (95) | 0 (0) | 0 (0) | 1 (5) | 19 (95) | 0 (0) | 0 (0) | 1 (5) |
CAZ | 8 (40) | 10 (50) | 2 (10) | 0 (0) | 12 (60) | 7 (35) | 1 (5) | 0 (0) | 12 (60) | 7 (35) | 1 (5) | 0 (0) |
IPM | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
MEM | 18 (90) | 2 (10) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
CIP | 17 (85) | 3 (15) | 0 (0) | 0 (0) | 18 (90) | 2 (10) | 0 (0) | 0 (0) | 19 (95) | 1 (5) | 0 (0) | 0 (0) |
AN | 7 (35) | 13 (65) | 0 (0) | 0 (0) | 15 (75) | 5 (25) | 0 (0) | 0 (0) | 18 (90) | 2 (10) | 0 (0) | 0 (0) |
GM | 19 (95) | 1 (5) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
NN | 14 (70) | 3 (15) | 3 (15) | 0 (0) | 15 (75) | 2 (10) | 3 (15) | 0 (0) | 15 (75) | 2 (10) | 3 (15) | 0 (0) |
SXT | 19 (95) | 0 (0) | 0 (0) | 1 (5) | 19 (95) | 0 (0) | 0 (0) | 1 (5) | 19 (95) | 0 (0) | 0 (0) | 1 (5) |
Total (N = 200) | 139 (69.5) | 47 (23.5) | 12 (6) | 2 (1) | 164 (82) | 29 (14.5) | 5 (2.5) | 2 (1) | 174 (87) | 19 (9.5) | 5 (2.5) | 2 (1) |
TZP | 8 (40) | 11 (55) | 1 (5) | 0 (0) | 17 (85) | 3 (15) | 0 (0) | 0 (0) | 18 (90) | 2 (10) | 0 (0) | 0 (0) |
CTX | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
CAZ | 19 (95) | 1 (5) | 0 (0) | 0 (0) | 19 (95) | 1 (5) | 0 (0) | 0 (0) | 18 (90) | 2 (10) | 0 (0) | 0 (0) |
IPM | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
MEM | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
CIP | 18 (90) | 2 (10) | 0 (0) | 0 (0) | 18 (90) | 2 (10) | 0 (0) | 0 (0) | 17 (85) | 2 (10) | 0 (0) | 1 (5) |
AN | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
GM | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
NN | 13 (65) | 7 (35) | 0 (0) | 0 (0) | 17 (85) | 3 (15) | 0 (0) | 0 (0) | 17 (85) | 3 (15) | 0 (0) | 0 (0) |
SXT | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
Total (N = 200) | 178 (89) | 21 (10.5) | 1 (0.5) | 0 (0) | 191 (95.5) | 9 (4.5) | 0 (0) | 0 (0) | 190 (95) | 9 (4.5) | 0 (0) | 1 (0.5) |
FOX* | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
NOR* | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
GM | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
CC | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) | 20 (100) | 0 (0) | 0 (0) | 0 (0) |
Total (N = 80) | 80 (100) | 0 (0) | 0 (0) | 0 (0) | 80 (100) | 0 (0) | 0 (0) | 0 (0) | 80 (100) | 0 (0) | 0 (0) | 0 (0) |
*EUCAST-RAST disk diffusion test results were compared with those of the EUCAST standard disk diffusion method.
Abbreviations: N, number; CA, categorical agreement; EUCAST, European Committee on Antimicrobial Susceptibility Testing; mEs, minor errors; MEs, major errors; VMEs, very major errors; TZP, piperacillin–tazobactam; CTX, cefotaxime; CAZ, ceftazidime; IPM, imipenem; MEM, meropenem; CIP, ciprofloxacin; AN, amikacin; GM, gentamicin; NN, tobramycin; SXT, trimethoprim–sulfamethoxazole; FOX, cefoxitin; NOR, norfloxacin; CC, clindamycin; RAST, rapid antimicrobial susceptibility testing.
The total number of mEs was high: 47 (23.5%) at 4 hours, 29 (14.5%) at 6 hours, and 19 (9.5%) at 8 hours. mEs were mainly observed for piperacillin–tazobactam, ceftazidime, and amikacin (50%-70%) at 4 hours, but the proportions decreased <35% after 8 hours.
The total number of MEs was 12 (6%) at 4 hours and five (2.5%) at both 6 and 8 hours. MEs were observed for piperacillin–tazobactam, cefotaxime, ceftazidime, and tobramycin (5%-30%) at 4 hours, and their proportions decreased <15% after 6 hours. Two VMEs were observed, including one for cefotaxime (5%) and one for trimethoprim–sulfamethoxazole (5%), at all time points.
The percentage of CA varied depending on the antimicrobial agent, from 0% to 100% at 4 hours, 30%-100% at 6 hours, and 60%-100% at 8 hours, but it improved over time. None of the percentages CA for
For
The total number of mEs was 21 (10.5%) at 4 hours and was nine (4.5%) at 6 and 8 hours; mEs were observed mainly for piperacillin–tazobactam (55%) and tobramycin (35%), and their proportion decreased to ≤15% after 6 and 8 hours. The was only one ME and one VME (5%) for piperacillin–tazobactam at 4 hours and for ciprofloxacin at 8 hours, respectively. The FDA criteria for CAs, MEs, and VMEs were met at 4, 6, and 8 hours, except for CA at 4 hours.
For
In general, the numbers of mEs, MEs, and VMEs decreased over time (Supplemental Data Figs. S1, S2, and S3).
Discrepancies were observed mainly for
VMEs and MEs for
Antimicrobial agent | Zone diameter (mm), S/I/R, and discrepancy of RAST | Reference (MIC, S/I/R) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
4 hr | 6 hr | 8 hr | |||||||||
TZP | 12 | R | ME | 14 | R | ME | 14 | R | ME | 8 | S |
TZP | 13 | R | ME | 16 | ATU | mE | 18 | S | CA | 2 | S |
TZP | 11 | R | ME | 15 | ATU | mE | 16 | ATU | mE | 2 | S |
TZP | 12 | R | ME | 15 | ATU | mE | 16 | ATU | mE | 8 | S |
TZP | 11 | R | ME | 15 | ATU | mE | 16 | ATU | mE | 8 | S |
TZP | 13 | R | ME | 18 | S | CA | 19 | S | CA | 2 | S |
CTX | 18 | S | VME | 21 | S | VME | 22 | S | VME | >8 | R |
CTX | 12 | R | ME | 19 | S | CA | 21 | S | CA | ≤ 0.5 | S |
CAZ | 11 | R | ME | 18 | S | CA | 20 | S | CA | ≤ 0.5 | S |
CAZ | 11 | R | ME | 13 | R | ME | 14 | R | ME | 4 | S |
NN | 11 | R | ME | 11 | R | ME | 11 | R | ME | 4 | S |
NN | 11 | R | ME | 12 | R | ME | 12 | R | ME | 4 | S |
NN | 11 | R | ME | 12 | R | ME | 12 | R | ME | 4 | S |
SXT | 21 | S | VME | 22 | S | VME | 24 | S | VME | >8 | R |
TZP | 12 | R | ME | 15 | ATU | mE | 15 | ATU | mE | 16 | S |
CIP | 15 | ATU | mE | 16 | ATU | mE | 19 | S | VME | 1 | R |
Total number of discrepancies | |||||||||||
ME | 13 | 5 | 5 | ||||||||
VME | 2 | 2 | 3 |
Abbreviations: CA, categorical agreement; VME, very major error; ME, major error; mE, minor error; S, susceptible; I, intermediate; ATU, area of technical uncertainty; R, resistant; TZP, piperacillin–tazobactam; CTX, cefotaxime; CAZ, ceftazidime; NN, tobramycin; SXT, trimethoprim–sulfamethoxazole; CIP, ciprofloxacin; MIC, minimal inhibitory concentration; RAST, rapid antimicrobial susceptibility testing.
In this study, 60 strains were tested for their susceptibility to antimicrobial agents using the EUCAST-RAST method, including 20 strains each of
Comparing the results at 4, 6, and 8 hours for each species, large differences were observed depending on the antimicrobial agents. For
Although EUCAST-RAST provides rapid results, there are some limitations in evaluating the applicability of this method. First, compared with the CLSI or EUCAST standard disk diffusion methods, EUCAST-RAST cannot be performed for various strains and antimicrobial agents. The RAST method has only been validated for eight species to date:
Despite these limitations, the RAST method shortens the TAT by more than one day; therefore, if applied properly according to laboratory conditions, AST results can be reported faster. Hence, EUCAST-RAST can be used for AST of positive blood cultures for certain bacterial species. However, the general application of EUCAST-RAST is limited to clinical microbiology laboratories, and further improvements are warranted.
None declared.
Conceptualization: Park JM and Yong D; formal analysis and data curation: Park JM and Kwon M; writing–original draft preparation: Park JM and Kwon M; writing–review and editing: Park JM, Kwon M, Hong KH, Lee H, and Yong D; supervision: Yong D. All authors read and agreed to the published version of the manuscript.
None declared.
This study was supported by the Hallym University Research Fund 2022 (HRF-202202-001).