Importance of the Molecular Epidemiological Monitoring of Carbapenem-Resistant Pseudomonas aeruginosa
2024; 44(5): 381-382
Ann Lab Med 2024; 44(1): 38-46
Published online September 4, 2023 https://doi.org/10.3343/alm.2024.44.1.38
Copyright © Korean Society for Laboratory Medicine.
Seri Jeong , M.D.1,*, Kibum Jeon , M.D.2,*, Nuri Lee , M.D.1, Min-Jeong Park , M.D.1, and Wonkeun Song, M.D.1
1Department of Laboratory Medicine, Kangnam Sacred Heart Hospital, Hallym University College of Medicine, Seoul, Korea; 2Department of Laboratory Medicine, Hangang Sacred Heart Hospital, Hallym University College of Medicine, Seoul, Korea
Correspondence to: Wonkeun Song, M.D.
Department of Laboratory Medicine, Kangnam Sacred Heart Hospital, Hallym University College of Medicine, 1 Shingil-ro, Youngdeungpo-gu, Seoul 07441, Korea
E-mail: swonkeun@hallym.or.kr
* These authors contributed equally to this study as co-first authors.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Background: Carbapenem-resistant Pseudomonas aeruginosa (CrPA) is a leading cause of healthcare-associated urinary tract infections (UTIs). Carbapenemase production is an important mechanism that significantly alters the efficacy of frequently used anti-pseudomonal agents. Reporting the current genotypic distribution of carbapenemase-producing P. aeruginosa (CPPA) isolates in relation to antimicrobial susceptibility, UTI risk factors, and mortality is necessary to increase the awareness and control of these strains.
Methods: In total, 1,652 non-duplicated P. aeruginosa strains were isolated from hospitalized patients between 2015 and 2020. Antimicrobial susceptibility, carbapenemase genotypes, risk factors for UTI, and associated mortality were analyzed.
Results: The prevalence of carbapenem-non-susceptible P. aeruginosa isolates showed a decreasing trend from 2015 to 2018 and then increased in the background of the emergence of New Delhi metallo-β-lactamase (NDM)-type isolates since 2019. The CPPA strains showed 100.0% non-susceptibility to all tested antibiotics, except aztreonam (94.5%) and colistin (5.9%). Carbapenems were identified as a risk and common predisposing factor for UTI (odds ratio [OR]=1.943) and mortality (OR=2.766). Intensive care unit (ICU) stay (OR=2.677) and white blood cell (WBC) count (OR=1.070) were independently associated with mortality.
Conclusions: The changing trend and genetic distribution of CPPA isolates emphasize the need for relentless monitoring to control further dissemination. The use of carbapenems, ICU stay, and WBC count should be considered risk factors, and aggressive antibiotic stewardship programs and monitoring may serve to prevent worse outcomes.
Keywords: Carbapenemase, Imipenemase, Metallo-β-lactamase, New Delhi metallo-β-lactamase, Pseudomonas aeruginosa, Urinary tract infection
The production of carbapenemases [9], overproduction of the MexAB-OprM efflux pump and AmpC β-lactamase, and inactivation of the OprD outer membrane protein [10] have been highlighted as important mechanisms underlying carbapenem resistance. Carbapenemases significantly alter the efficacy of frequently used anti-pseudomonal agents. Carbapenemase-producing genes such as Guiana extended-spectrum β-lactamase (
Intensive care unit (ICU) stay and inadequate empirical therapy have been identified as risk factors for the emergence of carbapenemase-producing
A total of 1,652 non-duplicated
The MICs of piperacillin, piperacillin–tazobactam, ceftazidime, cefepime, aztreonam, imipenem, meropenem, amikacin, gentamicin, ciprofloxacin, and colistin for the included
The genes encoding IMP-, Verona integron-encoded MBL (VIM)-, and NDM-type MBL in addition to
Clinical information was collected to assess the characteristics of UTIs. UTI was defined according to the criteria of the Centers for Disease Control and Prevention (CDC) [18]. The disease was confirmed by a single isolate at a density >100,000 colony-forming units (CFU)/mL in the urine. Patients with a density <100,000 CFU/mL of
The following variables were included: age; sex; source from which the isolate was recovered; year of isolation; hospitalization ward; comorbid conditions such as pulmonary disease and diabetes mellitus (DM); and prior use of carbapenems such as imipenem, meropenem, doripenem, and ertapenem at least three months before
The non-susceptibility rates of bacterial pathogens were calculated by dividing the number of non-susceptible isolates by the total number of strains. Univariate and multivariate binary logistic regression analyses were used to assess variables that correlated independently with the presence of UTI and mortality in patients with
A total of 1,652 non-duplicated
Among the 1,652 strains, 258 strains were Cns-CPPA (88 in 2015, 45 in 2016, 33 in 2017, 23 in 2018, 31 in 2019, and 38 in 2020), 84.9% of which were isolated from urine samples (Fig. 1). Other samples included respiratory tract (7.0%) and wound (2.3%) samples. From 2015 to 2018, all Cns-CPPA isolates were identified as IMP-type strains. NDM-type MBL-encoding strains were observed among the Cns-CPPA isolates obtained from urine samples in 2019 (26.9%, 7/26) and 2020 (68.0%, 17/25).
The antimicrobial susceptibility profiles of 503
The non-susceptibility rates of the 503
Among the 499 patients positive for infection with
Univariate and multivariate analyses of patients with UTI caused by
Variable | Univariate | Multivariate† | |||
---|---|---|---|---|---|
OR (95% CI) | OR (95% CI) | ||||
Age | 1.000 (0.990–1.009) | 0.944 | 1.089 (1.017–1.166) | 0.015 | |
Sex | |||||
Male | Reference | ||||
Female | 0.867 (0.596–1.262) | 0.458 | |||
Comorbidity | |||||
Pulmonary disease | 1.365 (0.890–2.093) | 0.154 | |||
DM | 0.753 (0.514–1.105) | 0.148 | |||
Susceptibility to carbapenem | |||||
CsPA | Reference | ||||
Cns-nCPPA | 0.717 (0.395–1.300) | 0.273 | |||
Cns-CPPA | 1.018 (0.688–1.505) | 0.931 | |||
Carbapenem use | 2.072 (1.339–3.204) | 0.001 | 1.943 (1.163–3.248) | 0.011 | |
Imipenem | 0.275 (0.025–3.054) | 0.293 | |||
Meropenem | - | ||||
Doripenem | 1.737 (0.954–3.164) | 0.071 | |||
Ertapenem | 2.740 (1.455–5.161) | 0.001 | |||
Laboratory finding | |||||
Procalcitonin (ng/mL) | 0.981 (0.927–1.037) | 0.492 | |||
CRP (mg/L) | 1.004 (1.000–1.009) | 0.042 | 1.003 (0.998–1.008) | 0.230 | |
WBC (109/L) | 1.045 (1.001–1.091) | 0.036 | 0.996 (0.938–1.059) | 0.908 | |
NLR | 1.029 (1.000–1.059) | 0.036 | 1.013 (0.970–1.058) | 0.557 | |
Glucose (mg/dL) | 0.998 (0.994–1.003) | 0.466 | |||
LD (IU/L) | 1.000 (1.000–1.001) | 0.819 |
*UTI was defined according to the CDC criteria [18]. Among 499 patients, 321 (64.3%) met the CDC criteria for UTI, whereas the remaining 178 (35.7%) patients were designated as a non-UTI group.
†Variables with
Abbreviations: CDC, Centers for Disease Control and Prevention; CI, confidence interval; Cns-CPPA, carbapenem-non-susceptible and carbapenemase-producing
The distribution and risk factors for mortality in patients positive for
Univariate and multivariate analyses of mortality in patients with
Variable | Univariate | Multivariate† | |||
---|---|---|---|---|---|
OR (95% CI) | OR (95% CI) | ||||
Age | 1.025 (1.003–1.047) | 0.027 | |||
Sex | |||||
Male | Reference | ||||
Female | 2.186 (1.163–4.110) | 0.015 | |||
Comorbidity | |||||
Pulmonary disease | 2.186 (1.15–4.153) | 0.017 | |||
DM | 2.417 (1.287–4.542) | 0.006 | |||
ICU stay | 4.966 (2.165–11.390) | <0.001 | 2.677 (1.105–6.485) | 0.029 | |
Susceptibility to carbapenem | |||||
CsPA | Reference | ||||
Cns-nCPPA | 2.972 (1.152–7.668) | 0.024 | |||
Cns-CPPA | 2.114 (1.025–4.363) | 0.043 | |||
Carbapenem use | 3.978 (2.095–7.553) | <0.001 | 2.766 (1.363–5.614) | 0.005 | |
Imipenem | - | ||||
Meropenem | 4.206 (1.832–9.658) | <0.001 | |||
Doripenem | 2.304 (1.074–4.943) | 0.043 | |||
Ertapenem | 2.313 (1.106–4.836) | 0.026 | |||
Laboratory finding | |||||
Procalcitonin | 1.029 (0.967–1.094) | 0.374 | |||
CRP | 1.008 (1.003–1.012) | 0.001 | |||
WBC | 1.115 (1.062–1.170) | <0.001 | 1.070 (1.004–1.141) | 0.039 | |
Neutrophil | 1.057 (1.026–1.089) | <0.001 | |||
Lymphocyte | 0.929 (0.891–0.969) | <0.001 | |||
NLR | 1.057 (1.027–1.088) | <0.001 | 1.032 (1.000–1.070) | 0.093 | |
Glucose | 1.009 (1.004–1.015) | 0.001 | |||
LD | 1.001 (1.000–1.002) | 0.401 |
*Among 499 patients, 43 (8.6%) belonged to the mortality group and the remaining 456 (91.4%) patients were designated to the survivor group.
†Variables with
Abbreviations: CI, confidence interval; Cns-CPPA, carbapenem-non-susceptible and carbapenemase-producing
This study revealed that the prevalence of non-susceptible
A trend analysis of multidrug-resistant hospital-acquired bacterial infections was performed to assess the impact of COVID-19, demonstrating that the OR (1.84) and incidence rate ratio (1.78) for CrPA both increased significantly following the outbreak of COVID-19 (March 2020 to September 2021) compared with rates recorded in the pre-pandemic period (March 2018 to September 2019) [19]. The prevalence of non-susceptible
According to our data, the NDM-type has emerged and become more prominent in Korea in recent years. Similarly, the emergence of NDM-producing
Considering the antimicrobial susceptibility profiles of the examined isolates, the Cns-CPPA stains exhibited 100.0% non-susceptibility to all tested antibiotic agents, except for aztreonam (94.5%) and colistin (5.9%). Carbapenemase producers show a multidrug-resistant profile as these strains hydrolyze all β-lactams except aztreonam and harbor gene cassettes containing resistance genes [31]. The relatively low susceptibility of CPPA to aztreonam may account for the different mechanisms of non-susceptibility in
Consistent with previous studies [34, 35], our study demonstrated that the use of carbapenems was an independent risk factor for UTI. Patients exposed to carbapenems are vulnerable to many invasive procedures involving medical devices, facilitating the cross-transmission of drug-resistant isolates [36]. A previous study demonstrated that urine was the main source of CPPA isolates associated with the presence of urinary catheters [37]. Therefore, UTI caused by these isolates could be associated with exposure to carbapenems, highlighting the need to carefully select an appropriate antibiotic in such cases.
Based on our findings, exposure to carbapenems may be a risk factor for mortality and UTI. The severity of infection in patients receiving carbapenems for treatment should be considered. A previous study [38] showed that carbapenem use was associated with 30-day mortality in patients positive for infection caused by
This study had some limitations. First, this was a retrospective study. Therefore, several variables that could not be controlled at the beginning of the study are present. A multivariate logistic regression model was used to adjust for the clinical features of patients. Second, the limited study population might have influenced the matching of cases, such as UTI, mortality, and control groups, leading to some unforeseen confounding factors. Third, some Cns-CPPA isolates may have been included in the Cns-nCPPA group because Cns-CPPA was defined by the detection of carbapenemase-encoding genes via multiplex real-time PCR.
In conclusion, the prevalence of non-susceptible
Supplementary materials can be found via https://doi.org/10.3343/alm.2024.44.1.38
alm-44-1-38-supple.pdfThe authors thank the medical technicians and staff of the clinical data warehouse for performing the experiments and assisting with data collection and extraction.
Conceptualization: Song W; data curation: Jeong S; methodology: Jeon K; validation: Lee N; writing—original draft: Jeong S; writing—review and editing: Park MJ and Song W. All authors have read and agreed to the published version of the manuscript.
None declared.
None declared.